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  miRNA     SEED     START    END     SITE TYPE    miRBase ID 
hsa-miR-4303 UCUGAGC 1 7 7mer-m8 MIMAT0016856
hsa-miR-654-3p AUGUCUG 4 10 7mer-m8 MIMAT0004814
hsa-miR-4428 AAGGAGA 10 17 8mer-1a MIMAT0018943
hsa-miR-3173-3p AAGGAGG 11 17 7mer-1a MIMAT0015048
hsa-miR-4477b UUAAGGA 12 19 8mer-1a MIMAT0019005
hsa-miR-3164 GUGACUU 21 28 8mer-1a MIMAT0015038
hsa-miR-134 GUGACUG 22 28 7mer-1a MIMAT0000447
hsa-miR-3118 GUGACUG 22 28 7mer-1a MIMAT0014980
hsa-miR-635 CUUGGGC 40 46 7mer-m8 MIMAT0003305
hsa-miR-3189-3p CCUUGGG 41 47 7mer-m8 MIMAT0015071
hsa-miR-4780 CCCUUGA 43 49 7mer-1a MIMAT0019939
hsa-miR-623 UCCCUUG 43 49 7mer-m8 MIMAT0003292
hsa-miR-2114 AGUCCCU 45 51 7mer-m8 MIMAT0011156
hsa-miR-4502 CUGAUGA 66 72 7mer-m8 MIMAT0019038
hsa-miR-1200 UCCUGAG 69 75 7mer-1a MIMAT0005863
hsa-miR-3074-5p UUCCUGC 70 76 7mer-1a MIMAT0019208
hsa-miR-4680-3p CUGAAUU 75 82 8mer-1a MIMAT0019765
hsa-miR-4427 CUGAAUA 76 82 7mer-1a MIMAT0018942
hsa-miR-3200-5p AUCUGAG 78 84 7mer-1a MIMAT0017392
hsa-miR-4659b-5p UGCCAUG 85 91 7mer-1a MIMAT0019733
hsa-miR-4776-3p UUGCCAU 85 92 8mer-1a MIMAT0019933
hsa-miR-4659a-5p UGCCAUG 85 91 7mer-1a MIMAT0019726
hsa-miR-508-5p ACUCCAG 99 105 7mer-m8 MIMAT0004778
hsa-miR-499a-5p CAGACUU 103 109 7mer-1a MIMAT0019897
hsa-miR-4494 CAGACUG 103 109 7mer-1a MIMAT0019029
hsa-miR-3942-3p UUCAGAU 105 111 7mer-1a MIMAT0019230
hsa-miR-1324 CAGACAG 114 121 8mer-1a MIMAT0005956
hsa-miR-3924 UAUGUAU 127 133 7mer-1a MIMAT0018199
hsa-miR-3689e GUGAUAU 140 146 7mer-1a MIMAT0019009
hsa-miR-3689a-5p GUGAUAU 140 146 7mer-1a MIMAT0018117
hsa-miR-3689b GUGAUAU 140 146 7mer-1a MIMAT0018180
hsa-miR-3689f GUGAUAU 140 146 7mer-1a MIMAT0019010
hsa-miR-4679 CUGUGAU 141 148 8mer-1a MIMAT0019763
hsa-miR-4677-3p CUGUGAG 142 148 7mer-1a MIMAT0019761
hsa-miR-760 GGCUCUG 145 152 8mer-1a MIMAT0004957
hsa-miR-3614-5p CACUUGG 150 157 8mer-1a MIMAT0017992
hsa-miR-4704-3p CAGUCAC 154 161 8mer-1a MIMAT0019804
hsa-miR-4425 GUUGGGA 170 176 7mer-m8 MIMAT0018940
hsa-miR-4259 AGUUGGG 171 178 8mer-1a MIMAT0016880
hsa-miR-4715-5p AGUUGGC 172 178 7mer-1a MIMAT0019824
hsa-miR-3935 GUAGAUA 181 188 8mer-1a MIMAT0018350
hsa-miR-3137 CUGUAGC 184 190 7mer-1a MIMAT0015005
hsa-miR-206 GGAAUGU 193 199 7mer-1a MIMAT0000462
hsa-miR-3673 UGGAAUG 193 199 7mer-m8 MIMAT0018096
hsa-miR-1 GGAAUGU 193 199 7mer-1a MIMAT0000416
hsa-miR-613 GGAAUGU 193 199 7mer-1a MIMAT0003281
hsa-miR-4694-3p AAAUGGA 196 202 7mer-m8 MIMAT0019787
hsa-miR-3662 AAAAUGA 198 204 7mer-1a MIMAT0018083
hsa-miR-4424 GAGUUAA 202 208 7mer-m8 MIMAT0018939
hsa-miR-3183 CCUCUCU 233 239 7mer-1a MIMAT0015063
hsa-miR-4723-3p CCUCUCU 233 239 7mer-1a MIMAT0019839




>SAMSN1_all_skip
GCTCAGACATCTCCTTAAATAAGTCACAGTTAGATGACTGCCCAAGGGAC
TCTGGTTGCTATATCTCATCAGGAAATTCAGATAATGGCAAAGAGGATCT
GGAGTCTGAAAATCTGTCTGACATGGTACATAAGATTATTATCACAGAGC
CAAGTGACTGAACACGCATTCCCAACTATATATCTACAGATGCATTCCAT
TTTAACTCTTCTTGAGCTAAAACGTCAAATAGGAGAGGAAGAT
Download SAMSN1_all_skip.fa file format



Updated on June 12, 2013