The left part shows step-by-step the computational approach used for the analysis of RNA-Seq datasets.
In the right part there is the workflow of the in silico predictive analysis of regulatory sequences,
performed both for coding and non-coding transcripts mapping to chromosome 21. Green boxes indicate data files;
the computational tools used to perform the analysis are indicated in orange; the "features" of interest are
indicated in blue; the databases and the datasets with data of regulatory sequences from external web
resources are indicated in white.
Note to the user:
In this website, the analysis of regulatory sequences (motifs for TFs, miRNAs, non-canonical splicing sites)
are computational predictions and therefore do not necessarily indicate the binding of a specific factor to
that nucleotide sequence.
CNR - Via Pietro Castellino,111, 80131, Napoli, Italy - Tel.: +39 081 6132393 - Fax: +39 081 6132597
Code & Graphic development by Daniela Evangelista
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