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  miRNA     SEED     START    END     SITE TYPE    miRBase ID 
hsa-miR-1247 CCCGUCC 8 14 7mer-m8 MIMAT0005899
hsa-miR-296-5p GGGCCCC 12 19 8mer-1a MIMAT0000690
hsa-miR-566 GGCGCCU 23 30 8mer-1a MIMAT0003230
hsa-miR-3691-3 CCAAGUC 32 38 7mer-m8 MIMAT0019224
hsa-miR-4480 GCCAAGU 33 39 7mer-m8 MIMAT0019014
hsa-miR-4316 GUGAGGC 38 44 7mer-m8 MIMAT0016867
hsa-miR-4710 GGUGAGG 39 45 7mer-m8 MIMAT0019815
hsa-miR-4691-3 CAGCCAC 49 55 7mer-1a MIMAT0019782
hsa-miR-3157-5 UCAGCCA 49 55 7mer-m8 MIMAT0015031
hsa-miR-4268 GCUCCUC 54 60 7mer-m8 MIMAT0016896
hsa-miR-3978 UGGAAAG 70 76 7mer-m8 MIMAT0019363
hsa-miR-3688-3 AUGGAAA 71 77 7mer-m8 MIMAT0018116
hsa-miR-1193 GGAUGGU 74 80 7mer-1a MIMAT0015049
hsa-miR-1287 GCUGGAU 76 82 7mer-m8 MIMAT0005878
hsa-miR-1207-3 CAGCUGG 78 84 7mer-m8 MIMAT0005872
hsa-miR-4722-3 CCUGCCA 91 97 7mer-m8 MIMAT0019837
hsa-miR-4763-5 GCCUGCC 92 98 7mer-m8 MIMAT0019912
hsa-miR-2861 GGGCCUG 94 100 7mer-m8 MIMAT0013802
hsa-miR-4512 AGGGCCU 95 101 7mer-m8 MIMAT0019049
hsa-miR-657 GCAGGUU 122 129 8mer-1a MIMAT0003335
hsa-miR-3665 GCAGGUG 123 129 7mer-1a MIMAT0018087
hsa-miR-1205 CUGCAGG 124 130 7mer-m8 MIMAT0005869
hsa-miR-614 AACGCCU 129 135 7mer-m8 MIMAT0003282
hsa-miR-3925-5 AGAGAAC 133 139 7mer-m8 MIMAT0018200
hsa-miR-1303 UUAGAGA 139 145 7mer-m8 MIMAT0005891
hsa-miR-103a GCAGCAU 154 160 7mer-1a MIMAT0000101
hsa-miR-107 GCAGCAU 154 160 7mer-1a MIMAT0000104
hsa-miR-1184 CUGCAGC 155 161 7mer-m8 MIMAT0005829
hsa-miR-4418 ACUGCAG 156 162 7mer-m8 MIMAT0018930
hsa-miR-509-5p ACUGCAG 156 162 7mer-m8 MIMAT0004779
hsa-miR-509-3- ACUGCAG 156 162 7mer-m8 MIMAT0004975
hsa-miR-361-3p CCCCCAG 166 172 7mer-1a MIMAT0004682
hsa-miR-494 GAAACAU 172 178 7mer-m8 MIMAT0002816
hsa-miR-4691-3 CAGCCAC 188 194 7mer-m8 MIMAT0019782
hsa-miR-4690-3 CAGCCCA 193 199 7mer-m8 MIMAT0019780
hsa-miR-2278 AGAGCAG 197 203 7mer-m8 MIMAT0011778
hsa-miR-4501 AUGUGAC 203 209 7mer-1a MIMAT0019037
hsa-miR-297 UGUAUGU 205 211 7mer-m8 MIMAT0004450
hsa-miR-567 GUAUGUU 205 211 7mer-1a MIMAT0003231
hsa-miR-4742-3 CUGUAUU 207 213 7mer-1a MIMAT0019873
hsa-miR-4757-5 GGCCUCU 211 217 7mer-m8 MIMAT0019901
hsa-miR-1234 CGGCCUG 213 219 7mer-1a MIMAT0005589
hsa-miR-4749-3 GCCCCUC 218 224 7mer-m8 MIMAT0019886
hsa-miR-328 UGGCCCU 221 227 7mer-1a MIMAT0000752
hsa-miR-3925-5 AGAGAAC 231 237 7mer-m8 MIMAT0018200
hsa-miR-3919 CAGAGAA 232 238 7mer-m8 MIMAT0018193
hsa-miR-3688-5 GUGGCAA 237 243 7mer-1a MIMAT0019223
hsa-miR-339-5p CCCUGUC 241 247 7mer-1a MIMAT0000764
hsa-miR-2114 AGUCCCU 243 249 7mer-m8 MIMAT0011156
hsa-miR-1827 GAGGCAG 250 256 7mer-1a MIMAT0006767
hsa-miR-4316 GUGAGGC 251 257 7mer-m8 MIMAT0016867
hsa-miR-128 CACAGUG 255 261 7mer-m8 MIMAT0000424
hsa-miR-1302 UGGGACA 260 267 8mer-1a MIMAT0005890
hsa-miR-4298 UGGGACA 260 267 8mer-1a MIMAT0016852
hsa-miR-3913-5 UUGGGAC 261 268 8mer-1a MIMAT0018187
hsa-miR-3122 UUGGGAC 261 268 8mer-1a MIMAT0014984
hsa-miR-604 GGCUGCG 276 283 8mer-1a MIMAT0003272
hsa-miR-647 UGGCUGC 277 283 7mer-m8 MIMAT0003317
hsa-miR-3064-5 CUGGCUG 278 284 7mer-m8 MIMAT0019864
hsa-miR-320e AAGCUGG 281 287 7mer-m8 MIMAT0015072
hsa-miR-320a AAAGCUG 282 288 7mer-m8 MIMAT0000510
hsa-miR-4429 AAAGCUG 282 288 7mer-m8 MIMAT0018944
hsa-miR-320d AAAGCUG 282 288 7mer-m8 MIMAT0006764
hsa-miR-320b AAAGCUG 282 288 7mer-m8 MIMAT0005792
hsa-miR-320c AAAGCUG 282 288 7mer-m8 MIMAT0005793
hsa-miR-3148 GGAAAAA 286 292 7mer-1a MIMAT0015021
hsa-miR-875-3p CUGGAAA 287 294 8mer-1a MIMAT0004923
hsa-miR-1299 UCUGGAA 288 295 8mer-1a MIMAT0005887
hsa-miR-4782-5 UCUGGAU 289 295 7mer-1a MIMAT0019944
hsa-miR-516b UCUGGAG 289 295 7mer-1a MIMAT0002859
hsa-miR-548aa AAAACCA 317 323 7mer-1a MIMAT0018447
hsa-miR-3163 AUAAAAU 319 325 7mer-1a MIMAT0015037
hsa-miR-490-3p AACCUGG 329 335 7mer-1a MIMAT0002806
hsa-miR-649 AACCUGU 329 335 7mer-1a MIMAT0003319
hsa-miR-3129-3 AACUAAU 333 339 7mer-1a MIMAT0019202
hsa-miR-4637 ACUAACU 335 341 7mer-m8 MIMAT0019694
hsa-miR-548ae AAAAACU 339 345 7mer-m8 MIMAT0018954
hsa-miR-548am AAAAACU 339 345 7mer-m8 MIMAT0019076
hsa-miR-548x AAAAACU 339 345 7mer-m8 MIMAT0015081
hsa-miR-548aj AAAAACU 339 345 7mer-m8 MIMAT0018990
hsa-miR-3667-3 CCUUCCU 346 352 7mer-1a MIMAT0018090
hsa-miR-4677-5 UGUUCUU 352 358 7mer-m8 MIMAT0019760
hsa-miR-2116 GUUCUUA 352 358 7mer-1a MIMAT0011160
hsa-miR-548c-3 AAAAAUC 358 364 7mer-1a MIMAT0003285
hsa-miR-518a-5 UGCAAAG 367 373 7mer-1a MIMAT0005457
hsa-miR-527 UGCAAAG 367 373 7mer-1a MIMAT0002862
hsa-miR-4327 GCUUGCA 369 375 7mer-m8 MIMAT0016889
hsa-miR-3188 GAGGCUU 372 378 7mer-m8 MIMAT0015070
hsa-miR-4695-5 AGGAGGC 374 380 7mer-m8 MIMAT0019788
hsa-miR-4459 CAGGAGG 375 382 8mer-1a MIMAT0018981
hsa-miR-4433 CAGGAGU 376 382 7mer-1a MIMAT0018949
hsa-miR-4768-3 CAGGAGA 376 382 7mer-1a MIMAT0019921
hsa-miR-4772-5 GAUCAGG 378 385 8mer-1a MIMAT0019926
hsa-miR-383 GAUCAGA 379 385 7mer-1a MIMAT0000738
hsa-miR-1200 UCCUGAG 383 389 7mer-1a MIMAT0005863
hsa-miR-3074-5 UUCCUGC 384 390 7mer-1a MIMAT0019208
hsa-miR-4536 GUGGUAG 398 404 7mer-1a MIMAT0019078
hsa-miR-548b-3 AAGAACC 425 431 7mer-m8 MIMAT0003254
hsa-miR-759 CAGAGUG 433 439 7mer-1a MIMAT0010497
hsa-miR-2114 AGUCCCU 440 446 7mer-m8 MIMAT0011156
hsa-miR-371b-5 CUCAAAA 446 452 7mer-m8 MIMAT0019892
hsa-miR-888 ACUCAAA 447 453 7mer-m8 MIMAT0004916
hsa-miR-4764-3 UAACUCC 450 456 7mer-1a MIMAT0019915
hsa-miR-3920 CUGAUUA 454 460 7mer-m8 MIMAT0018195
hsa-miR-3127-3 CCCCUUC 464 470 7mer-1a MIMAT0019201
hsa-miR-605 AAAUCCC 467 473 7mer-m8 MIMAT0003273
hsa-miR-4763-5 GCCUGCC 479 485 7mer-1a MIMAT0019912
hsa-miR-548v GCUACAG 490 496 7mer-m8 MIMAT0015020
hsa-miR-4734 CUGCGGG 496 502 7mer-1a MIMAT0019859
hsa-miR-4747-5 GGGAAGG 512 519 8mer-1a MIMAT0019882
hsa-miR-3122 UUGGGAC 515 521 7mer-1a MIMAT0014984
hsa-miR-3913-5 UUGGGAC 515 521 7mer-1a MIMAT0018187
hsa-miR-4659a- UGCCAUG 522 528 7mer-1a MIMAT0019726
hsa-miR-4659b- UGCCAUG 522 528 7mer-1a MIMAT0019733
hsa-miR-4776-3 UUGCCAU 522 528 7mer-m8 MIMAT0019933
hsa-miR-4747-5 GGGAAGG 529 535 7mer-1a MIMAT0019882
hsa-miR-4648 GUGGGAC 531 537 7mer-1a MIMAT0019710
hsa-miR-4769-5 GUGGGAU 531 537 7mer-1a MIMAT0019922
hsa-miR-4654 GUGGGAU 531 537 7mer-1a MIMAT0019720
hsa-miR-4687-3 GGCUGUU 535 541 7mer-1a MIMAT0019775
hsa-miR-4474-3 UGUGGCU 537 543 7mer-m8 MIMAT0019001
hsa-miR-203 UGAAAUG 542 548 7mer-m8 MIMAT0000264
hsa-miR-4766-5 CUGAAAG 544 550 7mer-1a MIMAT0019917
hsa-miR-761 CAGCAGG 551 558 8mer-1a MIMAT0010364
hsa-miR-3619-5 CAGCAGG 551 558 8mer-1a MIMAT0017999
hsa-miR-214 CAGCAGG 551 558 8mer-1a MIMAT0000271
hsa-miR-4291 UCAGCAG 552 558 7mer-m8 MIMAT0016922
hsa-miR-922 CAGCAGA 552 558 7mer-1a MIMAT0004972
hsa-miR-4274 AGCAGUC 559 565 7mer-m8 MIMAT0016906
hsa-miR-922 CAGCAGA 561 567 7mer-1a MIMAT0004972
hsa-miR-214 CAGCAGG 561 567 7mer-1a MIMAT0000271
hsa-miR-761 CAGCAGG 561 567 7mer-1a MIMAT0010364
hsa-miR-3619-5 CAGCAGG 561 567 7mer-1a MIMAT0017999
hsa-miR-4291 UCAGCAG 561 567 7mer-m8 MIMAT0016922
hsa-miR-512-5p ACUCAGC 563 569 7mer-m8 MIMAT0002822
hsa-miR-4769-3 CUGCCAU 575 581 7mer-m8 MIMAT0019923
hsa-miR-3185 GAAGAAG 588 594 7mer-1a MIMAT0015065
hsa-miR-4709-3 UGAAGAG 589 595 7mer-1a MIMAT0019812
hsa-miR-3672 UGAGACU 598 604 7mer-m8 MIMAT0018095
hsa-miR-4329 CUGAGAC 599 605 7mer-m8 MIMAT0016923
hsa-miR-146a GAGAACU 604 610 7mer-m8 MIMAT0000449
hsa-miR-146b-5 GAGAACU 604 610 7mer-m8 MIMAT0002809
hsa-miR-3925-5 AGAGAAC 605 611 7mer-m8 MIMAT0018200
hsa-miR-3647-3 GAAAAUU 613 620 8mer-1a MIMAT0018067
hsa-miR-3140-5 CCUGAAU 617 623 7mer-1a MIMAT0019204
hsa-miR-1200 UCCUGAG 618 624 7mer-1a MIMAT0005863
hsa-miR-4659b- UUCUUCU 622 628 7mer-1a MIMAT0019734
hsa-miR-4659a- UUCUUCU 622 628 7mer-1a MIMAT0019727
hsa-miR-204 UCCCUUU 626 633 8mer-1a MIMAT0000265
hsa-miR-211 UCCCUUU 626 633 8mer-1a MIMAT0000268
hsa-miR-623 UCCCUUG 627 633 7mer-1a MIMAT0003292
hsa-miR-4755-5 UUCCCUU 627 634 8mer-1a MIMAT0019895
hsa-miR-4446-5 UUUCCCU 628 634 7mer-m8 MIMAT0019233
hsa-miR-3184 GAGGGGC 640 647 8mer-1a MIMAT0015064
hsa-miR-423-5p GAGGGGC 640 647 8mer-1a MIMAT0004748
hsa-miR-4656 GGGCUGA 645 651 7mer-m8 MIMAT0019723
hsa-miR-4697-5 GGGGGCG 648 654 7mer-1a MIMAT0019791
hsa-miR-4488 GGGGGCG 648 654 7mer-1a MIMAT0019022
hsa-miR-637 CUGGGGG 649 655 7mer-m8 MIMAT0003307
hsa-miR-1343 UCCUGGG 651 657 7mer-m8 MIMAT0019776
hsa-miR-4257 CAGAGGU 661 667 7mer-m8 MIMAT0016878
hsa-miR-2355-5 UCCCCAG 665 671 7mer-m8 MIMAT0016895
hsa-miR-483-3p CACUCCU 669 675 7mer-1a MIMAT0002173
hsa-miR-1234 CGGCCUG 691 697 7mer-m8 MIMAT0005589
hsa-miR-3622a- CACCUGA 703 709 7mer-m8 MIMAT0018004
hsa-miR-3622b- CACCUGA 703 709 7mer-m8 MIMAT0018006
hsa-miR-1228 CACACCU 705 711 7mer-m8 MIMAT0005583
hsa-miR-3064-3 UGCCACA 708 714 7mer-m8 MIMAT0019865
hsa-miR-4727-5 UCUGCCA 710 717 8mer-1a MIMAT0019847
hsa-miR-4769-3 CUGCCAU 710 716 7mer-1a MIMAT0019923
hsa-miR-2276 CUGCAAG 719 726 8mer-1a MIMAT0011775
hsa-miR-4772-3 CUGCAAC 720 726 7mer-1a MIMAT0019927
hsa-miR-4755-5 UUCCCUU 735 742 8mer-1a MIMAT0019895
hsa-miR-204 UCCCUUU 735 741 7mer-1a MIMAT0000265
hsa-miR-211 UCCCUUU 735 741 7mer-1a MIMAT0000268
hsa-miR-623 UCCCUUG 735 741 7mer-1a MIMAT0003292
hsa-miR-4446-5 UUUCCCU 736 742 7mer-m8 MIMAT0019233
hsa-miR-603 ACACACU 746 752 7mer-m8 MIMAT0003271
hsa-miR-614 AACGCCU 754 760 7mer-1a MIMAT0003282
hsa-miR-107 GCAGCAU 768 774 7mer-1a MIMAT0000104
hsa-miR-103a GCAGCAU 768 774 7mer-1a MIMAT0000101 




>NM_004649
CGCGCATGGACGGGGCCCAGCTAGGCGCCAGGACTTGGCCTCACCCTCTG
GCTGAGGAGCTGTCGGCTGCTTTCCATCCAGCTGGGAGTCTGGCAGGCCC
TTTTTTTTTTTTCTTTGCCGAAACCTGCAGGCGTTCTCTCTCTAAGGAGG
ATGTGCTGCAGTGCATGGGGGATGTTTCTTCCTGGGTGTGGCTGGGCTGC
TCTCACATACAGAGGCCGAGGGGCCAATTCGTTCTCTGCCACAGGGACTT
GCCTCACTGTGTCCCAAAAACAAATCGCAGCCAGCTTTTCCAGAAATAGA
AAATTCTGCCGTCTGAGGTTTTATACTTCAGGTTAGTTAGTTTTTGGAAG
GAAGAACATTTTTAGGTTTGCAAGCCTCCTGATCAGGAAACCAGAAATAC
CACATTTATGGACCATGAAAGGTTGGTTCTTGACTCTGAAGGGACTTTTG
AGTTAATCAGCGTAAGGGGATTTCTAAAGCAGGCAATCCCTGTAGCCGCA
GAGAATAAACGCCTTCCCAAAATGGCAACTTCCCACAGCCACATTTCAGA
CCTGCTGAGACTGCTGAGTGAGGAATGGCAGTGAGGTTTCTTCAATTAGT
CTCAGTTCTCTTAATTTTCAGGAAGAAAGGGAAATTGCAGCCCCTCAGCC
CCCAGGATTGACCTCTGGGGAGTGATGGTAGCGTTGGTGCCAGGCCGTGG
GTTCAGGTGTGGCAGAAGCTTGCAGATGCGTCCGAAGGGAAATAAAGTGT
GTTGGCGTTAGACTTTGTGCTGCA
Download NM_004649.fa file format



Updated on June 12, 2013