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  miRNA     SEED     START    END     SITE TYPE    miRBase ID 
hsa-miR-875-3p CUGGAAA 6 12 7mer-1a MIMAT0004923
hsa-miR-1299 UCUGGAA 6 13 8mer-1a MIMAT0005887
hsa-miR-4782-5 UCUGGAU 7 13 7mer-1a MIMAT0019944
hsa-miR-516b UCUGGAG 7 13 7mer-1a MIMAT0002859
hsa-miR-4267 CCAGCUC 22 28 7mer-1a MIMAT0016893
hsa-miR-3180-5 UUCCAGA 24 30 7mer-1a MIMAT0015057
hsa-miR-2355-5 UCCCCAG 39 45 7mer-1a MIMAT0016895
hsa-miR-411 AGUAGAC 49 55 7mer-1a MIMAT0003329
hsa-miR-1278 AGUACUG 56 62 7mer-1a MIMAT0005936
hsa-miR-628-3p CUAGUAA 58 64 7mer-1a MIMAT0003297
hsa-miR-325 CUAGUAG 58 64 7mer-1a MIMAT0000771
hsa-miR-3647-3 GAAAAUU 71 77 7mer-m8 MIMAT0018067
hsa-miR-922 CAGCAGA 76 83 8mer-1a MIMAT0004972
hsa-miR-3619-5 CAGCAGG 77 83 7mer-1a MIMAT0017999
hsa-miR-4291 UCAGCAG 77 84 8mer-1a MIMAT0016922
hsa-miR-214 CAGCAGG 77 83 7mer-1a MIMAT0000271
hsa-miR-761 CAGCAGG 77 83 7mer-1a MIMAT0010364
hsa-miR-4311 AAAGAGA 85 92 8mer-1a MIMAT0016863
hsa-miR-1276 AAAGAGC 86 92 7mer-1a MIMAT0005930
hsa-miR-583 AAAGAGG 86 92 7mer-1a MIMAT0003248
hsa-miR-4427 CUGAAUA 91 97 7mer-m8 MIMAT0018942
hsa-miR-4419b AGGCUGA 94 101 8mer-1a MIMAT0019034
hsa-miR-4478 AGGCUGA 94 101 8mer-1a MIMAT0019006
hsa-miR-3929 AGGCUGA 94 101 8mer-1a MIMAT0018206
hsa-miR-194 GUAACAG 109 115 7mer-1a MIMAT0000460
hsa-miR-3545-3 UGAACUG 119 125 7mer-1a MIMAT0019814
hsa-miR-3192 CUGGGAG 132 138 7mer-m8 MIMAT0015076
hsa-miR-490-3p AACCUGG 135 141 7mer-m8 MIMAT0002806
hsa-miR-1273g GUGGUUG 146 152 7mer-1a MIMAT0020602
hsa-miR-4687-3 GGCUGUU 150 156 7mer-1a MIMAT0019775
hsa-miR-3064-5 CUGGCUG 151 157 7mer-m8 MIMAT0019864
hsa-miR-892b ACUGGCU 152 159 8mer-1a MIMAT0004918
hsa-miR-193b ACUGGCC 153 159 7mer-1a MIMAT0002819
hsa-miR-193a-3 ACUGGCC 153 159 7mer-1a MIMAT0000459
hsa-miR-125a-3 CAGGUGA 160 166 7mer-m8 MIMAT0004602
hsa-miR-3665 GCAGGUG 161 167 7mer-m8 MIMAT0018087
hsa-miR-4690-5 AGCAGGC 163 169 7mer-1a MIMAT0019779
hsa-miR-4703-5 AGCAAUA 195 201 7mer-m8 MIMAT0019801
hsa-miR-3942-5 AGCAAUA 195 201 7mer-m8 MIMAT0018358
hsa-miR-1276 AAAGAGC 199 205 7mer-m8 MIMAT0005930
hsa-miR-524-5p UACAAAG 202 208 7mer-m8 MIMAT0002849
hsa-miR-520d-5 UACAAAG 202 208 7mer-m8 MIMAT0002855
hsa-miR-3127-5 UCAGGGC 220 226 7mer-1a MIMAT0014990
hsa-miR-4724-3 UACCUUC 224 231 8mer-1a MIMAT0019842
hsa-miR-4330 CUCAGAU 242 248 7mer-1a MIMAT0016924
hsa-miR-216a AAUCUCA 244 250 7mer-m8 MIMAT0000273
hsa-miR-2054 UGUAAUA 251 258 8mer-1a MIMAT0009979
hsa-miR-4798-5 UCGGUAU 265 271 7mer-1a MIMAT0019974
hsa-miR-1236 CUCUUCC 269 275 7mer-1a MIMAT0005591
hsa-miR-4294 GGAGUCU 273 280 8mer-1a MIMAT0016849
hsa-miR-3198 UGGAGUC 274 280 7mer-m8 MIMAT0015083
hsa-miR-4309 UGGAGUC 274 280 7mer-m8 MIMAT0016859
hsa-miR-1289 GGAGUCC 274 280 7mer-1a MIMAT0005879
hsa-miR-4694-3 AAAUGGA 277 283 7mer-m8 MIMAT0019787
hsa-miR-105 CAAAUGC 279 285 7mer-1a MIMAT0000102
hsa-miR-607 UUCAAAU 280 287 8mer-1a MIMAT0003275
hsa-miR-3671 UCAAAUA 280 286 7mer-1a MIMAT0018094
hsa-miR-323b-5 GGUUGUC 289 295 7mer-1a MIMAT0001630
hsa-miR-548ab AAAGUAA 308 314 7mer-m8 MIMAT0018928
hsa-miR-548y AAAGUAA 308 314 7mer-m8 MIMAT0018354
hsa-miR-548a-5 AAAGUAA 308 314 7mer-m8 MIMAT0004803
hsa-miR-559 AAAGUAA 308 314 7mer-m8 MIMAT0003223
hsa-miR-548b-5 AAAGUAA 308 314 7mer-m8 MIMAT0004798
hsa-miR-548h AAAGUAA 308 314 7mer-m8 MIMAT0005928
hsa-miR-548w AAAGUAA 308 314 7mer-m8 MIMAT0015060
hsa-miR-548c-5 AAAGUAA 308 314 7mer-m8 MIMAT0004806
hsa-miR-548ak AAAGUAA 308 314 7mer-m8 MIMAT0019013
hsa-miR-548i AAAGUAA 308 314 7mer-m8 MIMAT0005935
hsa-miR-548d-5 AAAGUAA 308 314 7mer-m8 MIMAT0004812
hsa-miR-548j AAAGUAA 308 314 7mer-m8 MIMAT0005875
hsa-miR-3973 CAAAGUA 309 315 7mer-m8 MIMAT0019358
hsa-miR-2277-3 GACAGCG 316 322 7mer-1a MIMAT0011777
hsa-miR-542-3p GUGACAG 317 323 7mer-m8 MIMAT0003389
hsa-miR-4645-3 GACAGUA 322 328 7mer-1a MIMAT0019706
hsa-miR-542-3p GUGACAG 323 329 7mer-m8 MIMAT0003389
hsa-miR-1324 CAGACAG 331 337 7mer-1a MIMAT0005956
hsa-miR-34b AAUCACU 342 348 7mer-1a MIMAT0004676
hsa-miR-548m AAAGGUA 354 360 7mer-m8 MIMAT0005917
hsa-miR-873 CAGGAAC 359 365 7mer-1a MIMAT0004953
hsa-miR-3189-5 GCCCCAU 370 376 7mer-m8 MIMAT0019217
hsa-miR-650 GGAGGCA 375 381 7mer-1a MIMAT0003320
hsa-miR-3612 GGAGGCA 375 381 7mer-1a MIMAT0017989
hsa-miR-4443 UGGAGGC 375 381 7mer-m8 MIMAT0018961
hsa-miR-4802-5 AUGGAGG 376 382 7mer-m8 MIMAT0019981
hsa-miR-1184 CUGCAGC 390 396 7mer-1a MIMAT0005829
hsa-miR-3158-5 CUGCAGA 390 396 7mer-1a MIMAT0019211
hsa-miR-1205 CUGCAGG 390 396 7mer-1a MIMAT0005869
hsa-miR-3135b GCUGGAG 398 404 7mer-1a MIMAT0018985
hsa-miR-1287 GCUGGAU 398 404 7mer-1a MIMAT0005878
hsa-miR-330-3p CAAAGCA 423 429 7mer-1a MIMAT0000751
hsa-miR-4703-3 GUAGUUG 449 455 7mer-m8 MIMAT0019802
hsa-miR-196b AGGUAGU 451 458 8mer-1a MIMAT0001080
hsa-miR-196a AGGUAGU 451 458 8mer-1a MIMAT0000226
hsa-miR-3927 AGGUAGA 452 458 7mer-1a MIMAT0018202
hsa-miR-331-5p UAGGUAU 453 459 7mer-1a MIMAT0004700
hsa-miR-18b AAGGUGC 463 469 7mer-m8 MIMAT0001412
hsa-miR-18a AAGGUGC 463 469 7mer-m8 MIMAT0000072
hsa-miR-4735-3 AAGGUGC 463 469 7mer-m8 MIMAT0019861
hsa-miR-4761-5 CAAGGUG 464 470 7mer-m8 MIMAT0019908
hsa-miR-451b AGCAAGA 467 473 7mer-1a MIMAT0019840
hsa-miR-4766-3 UAGCAAU 468 474 7mer-1a MIMAT0019918
hsa-miR-4255 AGUGUUC 488 494 7mer-1a MIMAT0016885
hsa-miR-4662a- AAGAUAG 492 498 7mer-m8 MIMAT0019732
hsa-miR-4795-3 UAUUAUU 503 509 7mer-1a MIMAT0019969
hsa-miR-4705 CAAUCAC 536 542 7mer-1a MIMAT0019805
hsa-miR-600 CUUACAG 544 550 7mer-1a MIMAT0003268
hsa-miR-2116 GUUCUUA 546 553 8mer-1a MIMAT0011160
hsa-miR-4677-5 UGUUCUU 547 553 7mer-m8 MIMAT0019760
hsa-miR-3152-5 UUGCCUC 553 559 7mer-1a MIMAT0019207
hsa-miR-4774-3 UUGCCUA 553 559 7mer-1a MIMAT0019930
hsa-miR-554 CUAGUCC 570 576 7mer-1a MIMAT0003217
hsa-miR-3670 GAGCUCA 575 581 7mer-1a MIMAT0018093
hsa-miR-1264 AAGUCUU 589 595 7mer-m8 MIMAT0005791
hsa-miR-628-5p UGCUGAC 595 601 7mer-1a MIMAT0004809
hsa-miR-4699-5 GAAGAUU 601 607 7mer-m8 MIMAT0019794
hsa-miR-1253 GAGAAGA 603 609 7mer-m8 MIMAT0005904
hsa-miR-7 GGAAGAC 608 614 7mer-1a MIMAT0000252
hsa-miR-1299 UCUGGAA 610 616 7mer-m8 MIMAT0005887
hsa-miR-875-3p CUGGAAA 610 616 7mer-1a MIMAT0004923
hsa-miR-326 CUCUGGG 612 618 7mer-1a MIMAT0000756
hsa-miR-330-5p CUCUGGG 612 618 7mer-1a MIMAT0004693
hsa-miR-942 CUUCUCU 614 620 7mer-m8 MIMAT0004985
hsa-miR-135a AUGGCUU 618 625 8mer-1a MIMAT0000428
hsa-miR-135b AUGGCUU 618 625 8mer-1a MIMAT0000758
hsa-miR-1911 GAGUACC 640 647 8mer-1a MIMAT0007885
hsa-miR-320d AAAGCUG 646 652 7mer-m8 MIMAT0006764
hsa-miR-320c AAAGCUG 646 652 7mer-m8 MIMAT0005793
hsa-miR-320b AAAGCUG 646 652 7mer-m8 MIMAT0005792
hsa-miR-320a AAAGCUG 646 652 7mer-m8 MIMAT0000510
hsa-miR-4429 AAAGCUG 646 652 7mer-m8 MIMAT0018944
hsa-miR-4434 GGAGAAG 655 661 7mer-1a MIMAT0018950
hsa-miR-4516 GGAGAAG 655 661 7mer-1a MIMAT0019053
hsa-miR-4531 UGGAGAA 655 661 7mer-m8 MIMAT0019070
hsa-miR-3622b- GGCAUGG 659 665 7mer-m8 MIMAT0018005
hsa-miR-4423-3 UAGGCAC 662 668 7mer-1a MIMAT0018936
hsa-miR-3119 GGCUUUU 671 677 7mer-m8 MIMAT0014981
hsa-miR-3188 GAGGCUU 673 680 8mer-1a MIMAT0015070
hsa-miR-2467-5 GAGGCUC 674 680 7mer-1a MIMAT0019952
hsa-miR-3975 GAGGCUA 674 680 7mer-1a MIMAT0019360
hsa-miR-485-5p GAGGCUG 674 680 7mer-1a MIMAT0002175
hsa-miR-4649-3 CUGAGGC 675 682 8mer-1a MIMAT0019712
hsa-miR-4303 UCUGAGC 677 683 7mer-1a MIMAT0016856
hsa-miR-4775 UAAUUUU 698 704 7mer-m8 MIMAT0019931
hsa-miR-590-3p AAUUUUA 698 704 7mer-1a MIMAT0004801
hsa-miR-3065-5 CAACAAA 705 712 8mer-1a MIMAT0015066
hsa-miR-421 UCAACAG 707 713 7mer-1a MIMAT0003339
hsa-miR-1305 UUUCAAC 708 714 7mer-m8 MIMAT0005893
hsa-miR-4778-3 CUUCUUC 713 719 7mer-1a MIMAT0019937
hsa-miR-4659a- UUCUUCU 714 720 7mer-m8 MIMAT0019727
hsa-miR-4659b- UUCUUCU 714 720 7mer-m8 MIMAT0019734
hsa-miR-2116 GUUCUUA 716 722 7mer-1a MIMAT0011160
hsa-miR-4677-5 UGUUCUU 716 723 8mer-1a MIMAT0019760
hsa-miR-4273 UGUUCUC 717 723 7mer-1a MIMAT0016903
hsa-miR-375 UUGUUCG 718 724 7mer-1a MIMAT0000728
hsa-miR-144 ACAGUAU 724 730 7mer-m8 MIMAT0000436
hsa-miR-212 AACAGUC 726 732 7mer-1a MIMAT0000269
hsa-miR-132 AACAGUC 726 732 7mer-1a MIMAT0000426
hsa-miR-1182 AGGGUCU 734 740 7mer-m8 MIMAT0005827
hsa-miR-4789-3 ACACAUA 748 755 8mer-1a MIMAT0019960
hsa-miR-466 UACACAU 749 756 8mer-1a MIMAT0015002
hsa-miR-4643 ACACAUG 749 755 7mer-1a MIMAT0019703
hsa-miR-4672 UACACAG 750 756 7mer-1a MIMAT0019754
hsa-miR-3941 UACACAC 750 756 7mer-1a MIMAT0018357
hsa-miR-3682-3 GAUGAUA 776 782 7mer-m8 MIMAT0018110
hsa-miR-31 GGCAAGA 781 787 7mer-m8 MIMAT0000089
hsa-miR-4708-3 GCAAGGC 785 791 7mer-m8 MIMAT0019810
hsa-miR-31 GGCAAGA 787 793 7mer-1a MIMAT0000089
hsa-miR-182 UUGGCAA 788 794 7mer-m8 MIMAT0000259
hsa-miR-525-5p UCCAGAG 810 817 8mer-1a MIMAT0002838
hsa-miR-520a-5 UCCAGAG 810 817 8mer-1a MIMAT0002833
hsa-miR-3180-5 UUCCAGA 811 818 8mer-1a MIMAT0015057
hsa-miR-1197 AGGACAC 820 826 7mer-1a MIMAT0005955
hsa-miR-4511 AAGAACU 826 833 8mer-1a MIMAT0019048
hsa-miR-548b-3 AAGAACC 827 833 7mer-1a MIMAT0003254
hsa-miR-3129-3 AACUAAU 831 837 7mer-1a MIMAT0019202
hsa-miR-4477a UAUUAAG 835 841 7mer-1a MIMAT0019004
hsa-miR-1324 CAGACAG 850 856 7mer-m8 MIMAT0005956
hsa-miR-525-5p UCCAGAG 853 859 7mer-1a MIMAT0002838
hsa-miR-520a-5 UCCAGAG 853 859 7mer-1a MIMAT0002833
hsa-miR-3180-5 UUCCAGA 853 859 7mer-m8 MIMAT0015057 




>NM_001085455
CCAACTTCCAGAATTTATAGCAGCTGGAAATTGCCCAATGGGGAAGATTC
TACTAAGTACTAGAACGTCTAATTTTCTGCTGAATCTCTTTATTCAGCCT
AAGAATCTTGTTACATTAAGTTCAAATACAACTCCCAGGTTTATTAACCA
CAGCCAGTATCACCTGCTAGGTTTTCTTTTTTCTGTTGTTCTGTTATTGC
TCTTTGTACTAAAAGCTGACCCTGAAGGTAACATCATTATTTCTGAGATT
TATTACAATGGACTTACCGAAGAGACTCCATTTGAAATACAACCATCACC
GGCTTTCTTACTTTGGCTGTCACTGTCACTTGTCTGACAGTGTGATTATC
ACCTACCTTTCCTGATGAAATGGGGCCTCCATGGTTTGACTGCAGATTCC
AGCATGCAAATTCATTCGGATGGCTTTGATTGTCATTAATATTTTTGTCA
ACTACCTAACTAGCACCTTGCTAATAAGCCGATAGAAAACACTATCTTGA
GCATAATAAGTTGAACTATTTCATCCTTTTCTTACTGATTGATTGTAAGA
ACAGGCAAATAGCAATGGTGACTAGAGCTCAAAAATAGAAGACTTCAGCA
AATCTTCTCTTCCAGAGAAGCCATAAAACAAGATTCACTGGTACTCAGCT
TTTGTTCTCCATGCCTAAGAAAAAGCCTCAGAATTAGCTAAAGCATGAAA
ATTATTTGTTGAAAGAAGAACAAATACTGTTAGAGACCCTTTACAATTAT
GTGTAATCTGCGTTTAGGATTCTCCTATCATCTTGCCTTGCCAATTTATT
GCATTCTGACTCTGGAAAATGTCCTAGTTCTTAGTTAATAAACAAATTTC
TGTCTGGAA
Download NM_001085455.fa file format



Updated on June 12, 2013