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  miRNA     SEED     START    END     SITE TYPE    miRBase ID 
hsa-miR-4747-5 GGGAAGG 6 12 7mer-m8 MIMAT0019882
hsa-miR-4271 GGGGAAG 7 14 8mer-1a MIMAT0016901
hsa-miR-4725-3 GGGGAAG 7 14 8mer-1a MIMAT0019844
hsa-miR-2110 UGGGGAA 8 15 8mer-1a MIMAT0010133
hsa-miR-3150a- UGGGGAG 9 15 7mer-1a MIMAT0015023
hsa-miR-4538 AGCUUGG 12 18 7mer-m8 MIMAT0019081
hsa-miR-4453 AGCUUGG 12 18 7mer-m8 MIMAT0018975
hsa-miR-4633-3 GGAGCUA 15 21 7mer-1a MIMAT0019690
hsa-miR-520a-3 AAGUGCU 25 31 7mer-m8 MIMAT0002834
hsa-miR-520e AAGUGCU 25 31 7mer-m8 MIMAT0002825
hsa-miR-372 AAGUGCU 25 31 7mer-m8 MIMAT0000724
hsa-miR-302e AAGUGCU 25 31 7mer-m8 MIMAT0005931
hsa-miR-302a AAGUGCU 25 31 7mer-m8 MIMAT0000684
hsa-miR-520d-3 AAGUGCU 25 31 7mer-m8 MIMAT0002856
hsa-miR-520c-3 AAGUGCU 25 31 7mer-m8 MIMAT0002846
hsa-miR-302b AAGUGCU 25 31 7mer-m8 MIMAT0000715
hsa-miR-302c AAGUGCU 25 31 7mer-m8 MIMAT0000717
hsa-miR-520b AAGUGCU 25 31 7mer-m8 MIMAT0002843
hsa-miR-302d AAGUGCU 25 31 7mer-m8 MIMAT0000718
hsa-miR-373 AAGUGCU 25 31 7mer-m8 MIMAT0000726
hsa-miR-4480 GCCAAGU 28 34 7mer-m8 MIMAT0019014
hsa-miR-3157-5 UCAGCCA 31 37 7mer-m8 MIMAT0015031
hsa-miR-4691-3 CAGCCAC 31 37 7mer-1a MIMAT0019782
hsa-miR-219-2- GAAUUGU 37 44 8mer-1a MIMAT0004675
hsa-miR-2964a- GAAUUGC 38 44 7mer-1a MIMAT0019748
hsa-miR-4452 UGAAUUC 39 45 7mer-1a MIMAT0018974
hsa-miR-2052 GUUUUGA 42 49 8mer-1a MIMAT0009977
hsa-miR-3676 CGUGUUU 45 51 7mer-m8 MIMAT0018100
hsa-miR-4533 GGAAGGA 61 67 7mer-m8 MIMAT0019072
hsa-miR-4476 AGGAAGG 62 68 7mer-m8 MIMAT0019003
hsa-miR-3978 UGGAAAG 67 73 7mer-m8 MIMAT0019363
hsa-miR-3688-3 AUGGAAA 68 74 7mer-m8 MIMAT0018116
hsa-miR-2392 AGGAUGG 71 78 8mer-1a MIMAT0019043
hsa-miR-1265 AGGAUGU 72 78 7mer-1a MIMAT0005918
hsa-miR-651 UUAGGAU 73 79 7mer-m8 MIMAT0003321
hsa-miR-1972 CAGGCCA 83 89 7mer-m8 MIMAT0009447
hsa-miR-1205 CUGCAGG 86 92 7mer-m8 MIMAT0005869
hsa-miR-4429 AAAGCUG 90 96 7mer-m8 MIMAT0018944
hsa-miR-320d AAAGCUG 90 96 7mer-m8 MIMAT0006764
hsa-miR-320c AAAGCUG 90 96 7mer-m8 MIMAT0005793
hsa-miR-320a AAAGCUG 90 96 7mer-m8 MIMAT0000510
hsa-miR-320b AAAGCUG 90 96 7mer-m8 MIMAT0005792
hsa-miR-4470 GGCAAAC 94 100 7mer-1a MIMAT0018997
hsa-miR-182 UUGGCAA 95 101 7mer-m8 MIMAT0000259
hsa-miR-4781-3 AUGUUGG 98 104 7mer-m8 MIMAT0019943
hsa-miR-409-3p AAUGUUG 99 106 8mer-1a MIMAT0001639
hsa-miR-4279 UCUCCUC 113 119 7mer-m8 MIMAT0016909
hsa-miR-4502 CUGAUGA 128 135 8mer-1a MIMAT0019038
hsa-miR-4762-3 UUCUGAU 130 136 7mer-m8 MIMAT0019911
hsa-miR-4277 CAGUUCU 133 140 8mer-1a MIMAT0016908
hsa-miR-26a UCAAGUA 141 147 7mer-m8 MIMAT0000082
hsa-miR-1297 UCAAGUA 141 147 7mer-m8 MIMAT0005886
hsa-miR-26b UCAAGUA 141 147 7mer-m8 MIMAT0000083
hsa-miR-4465 UCAAGUA 141 147 7mer-m8 MIMAT0018992
hsa-miR-1208 CACUGUU 147 153 7mer-1a MIMAT0005873
hsa-miR-4768-5 UUCUCUC 152 158 7mer-m8 MIMAT0019920
hsa-miR-942 CUUCUCU 153 159 7mer-m8 MIMAT0004985
hsa-miR-1237 CCUUCUG 155 161 7mer-1a MIMAT0005592
hsa-miR-1248 CCUUCUU 155 161 7mer-1a MIMAT0005900
hsa-miR-4668-5 GGGAAAA 167 174 8mer-1a MIMAT0019745
hsa-miR-3153 GGGAAAG 168 174 7mer-1a MIMAT0015026
hsa-miR-4646-5 CUGGGAA 169 176 8mer-1a MIMAT0019707
hsa-miR-3192 CUGGGAG 170 176 7mer-1a MIMAT0015076
hsa-miR-4314 UCUGGGA 170 176 7mer-m8 MIMAT0016868
hsa-miR-326 CUCUGGG 171 177 7mer-m8 MIMAT0000756
hsa-miR-330-5p CUCUGGG 171 177 7mer-m8 MIMAT0004693
hsa-miR-4680-5 GAACUCU 174 181 8mer-1a MIMAT0019764
hsa-miR-3545-3 UGAACUG 176 182 7mer-1a MIMAT0019814
hsa-miR-23c UCACAUU 188 194 7mer-m8 MIMAT0018000
hsa-miR-23a UCACAUU 188 194 7mer-m8 MIMAT0000078
hsa-miR-23b UCACAUU 188 194 7mer-m8 MIMAT0000418
hsa-miR-224 AAGUCAC 191 197 7mer-m8 MIMAT0000281
hsa-miR-548t AAAAGUG 194 200 7mer-1a MIMAT0015009
hsa-miR-548n AAAAGUA 194 200 7mer-1a MIMAT0005916
hsa-miR-548aa AAAACCA 211 217 7mer-m8 MIMAT0018447
hsa-miR-548z AAAAACC 212 218 7mer-m8 MIMAT0018446
hsa-miR-548d-3 AAAAACC 212 218 7mer-m8 MIMAT0003323
hsa-miR-548ac AAAAACC 212 218 7mer-m8 MIMAT0018938
hsa-miR-4719 CACAAAU 216 222 7mer-1a MIMAT0019832
hsa-miR-513b UCACAAG 217 223 7mer-1a MIMAT0005788
hsa-miR-490-5p CAUGGAU 225 231 7mer-1a MIMAT0004764
hsa-miR-802 AGUAACA 233 239 7mer-1a MIMAT0004185
hsa-miR-5047 UGCAGCU 246 253 8mer-1a MIMAT0020541
hsa-miR-1301 UGCAGCU 246 253 8mer-1a MIMAT0005797
hsa-miR-4660 GCAGCUC 246 252 7mer-1a MIMAT0019728
hsa-miR-1272 AUGAUGA 256 263 8mer-1a MIMAT0005925
hsa-miR-1322 AUGAUGC 257 263 7mer-1a MIMAT0005953
hsa-miR-539 GAGAAAU 267 273 7mer-1a MIMAT0003163
hsa-miR-580 UGAGAAU 268 274 7mer-1a MIMAT0003245
hsa-miR-409-3p AAUGUUG 272 278 7mer-m8 MIMAT0001639
hsa-miR-653 UGUUGAA 277 283 7mer-m8 MIMAT0003328
hsa-miR-3659 GAGUGUU 280 286 7mer-m8 MIMAT0018080
hsa-miR-122 GGAGUGU 281 287 7mer-m8 MIMAT0000421
hsa-miR-499a-5 CAGACUU 317 323 7mer-m8 MIMAT0019897
hsa-miR-4650-3 GGUAGAA 326 333 8mer-1a MIMAT0019714
hsa-miR-3529 GGUAGAC 327 333 7mer-1a MIMAT0019828
hsa-miR-379 GGUAGAC 327 333 7mer-1a MIMAT0000733
hsa-miR-4451 GGUAGAG 327 333 7mer-1a MIMAT0018973
hsa-miR-3622b- GGCAUGG 331 337 7mer-m8 MIMAT0018005
hsa-miR-3910 AAGGCAU 333 339 7mer-m8 MIMAT0018184
hsa-miR-548an AAAGGCA 334 340 7mer-m8 MIMAT0019079
hsa-miR-488 UGAAAGG 336 343 8mer-1a MIMAT0004763
hsa-miR-548aj AAAAACU 345 352 8mer-1a MIMAT0018990
hsa-miR-548am AAAAACU 345 352 8mer-1a MIMAT0019076
hsa-miR-548ae AAAAACU 345 352 8mer-1a MIMAT0018954
hsa-miR-548x AAAAACU 345 352 8mer-1a MIMAT0015081
hsa-miR-548ac AAAAACC 346 352 7mer-1a MIMAT0018938
hsa-miR-548z AAAAACC 346 352 7mer-1a MIMAT0018446
hsa-miR-548d-3 AAAAACC 346 352 7mer-1a MIMAT0003323
hsa-miR-3942-3 UUCAGAU 355 362 8mer-1a MIMAT0019230
hsa-miR-3160-5 GCUUUCU 359 365 7mer-1a MIMAT0019212
hsa-miR-369-3p AUAAUAC 403 409 7mer-m8 MIMAT0000721
hsa-miR-2054 UGUAAUA 407 413 7mer-m8 MIMAT0009979
hsa-miR-380 AUGUAAU 408 415 8mer-1a MIMAT0000735
hsa-miR-4495 AUGUAAA 409 415 7mer-1a MIMAT0019030
hsa-miR-4517 AAUAUGA 412 418 7mer-1a MIMAT0019054
hsa-miR-4420 UCACUGA 419 426 8mer-1a MIMAT0018933
hsa-miR-4636 ACUCGUG 429 435 7mer-1a MIMAT0019693
hsa-miR-590-3p AAUUUUA 438 444 7mer-1a MIMAT0004801
hsa-miR-4775 UAAUUUU 438 444 7mer-m8 MIMAT0019931
hsa-miR-4735-5 CUAAUUU 439 445 7mer-m8 MIMAT0019860
hsa-miR-504 GACCCUG 444 450 7mer-1a MIMAT0002875
hsa-miR-4725-5 GACCCUG 444 450 7mer-1a MIMAT0019843
hsa-miR-563 GGUUGAC 447 454 8mer-1a MIMAT0003227
hsa-miR-3678-3 UGCAGAG 459 465 7mer-1a MIMAT0018103
hsa-miR-4645-3 GACAGUA 469 475 7mer-1a MIMAT0019706
hsa-miR-514b-3 UUGACAC 471 477 7mer-1a MIMAT0015088
hsa-miR-514 UUGACAC 471 477 7mer-1a MIMAT0002883
hsa-miR-2052 GUUUUGA 473 479 7mer-m8 MIMAT0009977
hsa-miR-4328 CAGUUUU 475 482 8mer-1a MIMAT0016926
hsa-miR-3670 GAGCUCA 480 487 8mer-1a MIMAT0018093
hsa-miR-550b CUUACUC 493 499 7mer-1a MIMAT0018445
hsa-miR-4716-5 CCAUGUU 509 516 8mer-1a MIMAT0019826
hsa-miR-3914 AGGAACC 524 530 7mer-1a MIMAT0018188
hsa-miR-651 UUAGGAU 526 532 7mer-1a MIMAT0003321
hsa-miR-3145-3 GAUAUUU 530 536 7mer-m8 MIMAT0015016
hsa-miR-4662a- AAGAUAG 533 539 7mer-1a MIMAT0019732
hsa-miR-4705 CAAUCAC 540 546 7mer-1a MIMAT0019805
hsa-miR-4272 AUUCAAC 543 549 7mer-1a MIMAT0016902
hsa-miR-4495 AUGUAAA 550 556 7mer-m8 MIMAT0019030
hsa-miR-205 CCUUCAU 555 561 7mer-m8 MIMAT0000266
hsa-miR-4297 GCCUUCC 557 563 7mer-1a MIMAT0016846
hsa-miR-532-5p AUGCCUU 558 564 7mer-m8 MIMAT0002888
hsa-miR-3646 AAAUGAA 564 570 7mer-m8 MIMAT0018065
hsa-miR-3662 AAAAUGA 565 571 7mer-m8 MIMAT0018083
hsa-miR-548c-3 AAAAAUC 567 573 7mer-1a MIMAT0003285
hsa-miR-577 AGAUAAA 570 576 7mer-m8 MIMAT0003242
hsa-miR-486-3p GGGGCAG 575 581 7mer-m8 MIMAT0004762
hsa-miR-4688 AGGGGCA 576 582 7mer-m8 MIMAT0019777
hsa-miR-4708-5 GAGAUGC 598 604 7mer-m8 MIMAT0019809
hsa-miR-3150b- GAGGAGA 601 608 8mer-1a MIMAT0018194
hsa-miR-4784 GAGGAGA 601 608 8mer-1a MIMAT0019948
hsa-miR-4689 UGAGGAG 602 609 8mer-1a MIMAT0019778
hsa-miR-3915 UGAGGAA 603 609 7mer-1a MIMAT0018189
hsa-miR-1224-5 UGAGGAC 603 609 7mer-1a MIMAT0005458
hsa-miR-1304 UUGAGGC 604 610 7mer-1a MIMAT0005892
hsa-miR-579 UCAUUUG 607 614 8mer-1a MIMAT0003244
hsa-miR-664 AUUCAUU 609 615 7mer-m8 MIMAT0005949
hsa-miR-4760-3 AAUUCAU 610 617 8mer-1a MIMAT0019907
hsa-miR-4735-5 CUAAUUU 613 619 7mer-1a MIMAT0019860
hsa-miR-4717-5 AGGCCAC 621 628 8mer-1a MIMAT0019829
hsa-miR-4422 AAAGCAU 628 634 7mer-m8 MIMAT0018935
hsa-miR-330-3p CAAAGCA 629 635 7mer-m8 MIMAT0000751
hsa-miR-527 UGCAAAG 631 637 7mer-m8 MIMAT0002862
hsa-miR-518a-5 UGCAAAG 631 637 7mer-m8 MIMAT0005457
hsa-miR-2276 CUGCAAG 633 639 7mer-1a MIMAT0011775
hsa-miR-4772-3 CUGCAAC 633 639 7mer-1a MIMAT0019927
hsa-miR-1294 GUGAGGU 646 652 7mer-m8 MIMAT0005884
hsa-miR-4710 GGUGAGG 647 653 7mer-m8 MIMAT0019815
hsa-miR-658 GCGGAGG 656 662 7mer-1a MIMAT0003336
hsa-miR-147b UGUGCGG 658 664 7mer-m8 MIMAT0004928
hsa-miR-5096 UUUCACC 667 673 7mer-1a MIMAT0020603
hsa-miR-4328 CAGUUUU 672 678 7mer-m8 MIMAT0016926
hsa-miR-145 UCCAGUU 674 681 8mer-1a MIMAT0000437
hsa-miR-3180-5 UUCCAGA 676 682 7mer-1a MIMAT0015057
hsa-miR-4641 GCCCAUG 682 688 7mer-1a MIMAT0019701
hsa-miR-365 AAUGCCC 684 690 7mer-m8 MIMAT0000710
hsa-miR-548u AAAGACU 693 700 8mer-1a MIMAT0015013
hsa-miR-4477a UAUUAAG 702 708 7mer-1a MIMAT0019004
hsa-miR-4694-5 GGUGUUA 710 716 7mer-1a MIMAT0019786
hsa-miR-466 UACACAU 720 726 7mer-m8 MIMAT0015002
hsa-miR-4643 ACACAUG 720 726 7mer-1a MIMAT0019703
hsa-miR-4789-3 ACACAUA 720 726 7mer-1a MIMAT0019960
hsa-miR-548an AAAGGCA 728 734 7mer-m8 MIMAT0019079
hsa-miR-3658 UUAAGAA 733 739 7mer-m8 MIMAT0018078
hsa-miR-3653 UAAGAAG 733 739 7mer-1a MIMAT0018073 




>NM_001080444
CAAAGCCTTCCCCAAGCTCCACTGAGCACTTGGCTGACAATTCAAAACAC
GGCGATGGCATCCTTCCTTTCCATCCTAAGACTGGCCTGCAGCTTTGCCA
ACATTACCTGAAGAGGAGATGTCGGAGTCATCAGAACTGATACTTGACAG
TGAGAGAAGGAATCGATTTTCCCAGAGTTCAAAGTAGAATGTGACTTTTA
AGAGGTTTCATGGTTTTTGTGAATTCCATGAAGTTACTAAGTAAAAGCTG
CAAATTCATCATAATTTTTCTCAACATTCAACACTCCTACTTGTTAATCC
AACAAATGGTAGATAAAAGTCTGTATTCTACCATGCCTTTCAAAAGTTTT
TATTATCTGAAAGCATATGAAGATGATATTTATGTATATTTAATATGTAG
GGGTATTATTACATATTATCAGTGAAATACGAGTATAAAAATTAGGGTCA
ACCAGAAATCTGCAATTGACTGTCAAAACTGAGCTCAGTTAAAGTAAGAT
TCAATTCTAACATGGATGTGCACGTTCCTAAATATCTTATGATTGAATAT
TTACATGAAGGCATTCATTTTTATCTGCCCCTTTATCAGACCTATTTGCA
TCTCCTCAAATGAATTAGATGTGGCCTATGCTTTGCAGAGGATGGACCTC
ACCTACTCCGCACACCGTGAAAAAACTGGAAATGGGCATTGTAGTCTTTA
ATTAATAAAAACACCAAAAATGTGTATTGCCTTTCTTAA
Download NM_001080444.fa file format



Updated on June 12, 2013