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  miRNA     SEED     START    END     SITE TYPE    miRBase ID 
hsa-miR-4330 CUCAGAU 3 9 7mer-1a MIMAT0016924
hsa-miR-1248 CCUUCUU 7 13 7mer-1a MIMAT0005900
hsa-miR-1237 CCUUCUG 7 13 7mer-1a MIMAT0005592
hsa-miR-574-5p GAGUGUG 16 22 7mer-m8 MIMAT0004795
hsa-miR-1208 CACUGUU 31 37 7mer-1a MIMAT0005873
hsa-miR-598 ACGUCAU 35 41 7mer-1a MIMAT0003266
hsa-miR-4534 GAUGGAG 42 48 7mer-m8 MIMAT0019073
hsa-miR-1273f GAGAUGG 44 51 8mer-1a MIMAT0020601
hsa-miR-4708-5 GAGAUGC 45 51 7mer-1a MIMAT0019809
hsa-miR-143 GAGAUGA 45 51 7mer-1a MIMAT0000435
hsa-miR-4770 GAGAUGA 45 51 7mer-1a MIMAT0019924
hsa-miR-576-3p AGAUGUG 50 56 7mer-m8 MIMAT0004796
hsa-miR-1827 GAGGCAG 55 62 8mer-1a MIMAT0006767
hsa-miR-4649-3 CUGAGGC 57 63 7mer-m8 MIMAT0019712
hsa-miR-4420 UCACUGA 60 66 7mer-m8 MIMAT0018933
hsa-miR-146b-3 GCCCUGU 72 78 7mer-1a MIMAT0004766
hsa-miR-3173-5 GCCCUGC 72 78 7mer-1a MIMAT0019214
hsa-miR-874 UGCCCUG 72 78 7mer-m8 MIMAT0004911
hsa-miR-1291 GGCCCUG 86 92 7mer-1a MIMAT0005881
hsa-miR-328 UGGCCCU 86 93 8mer-1a MIMAT0000752
hsa-miR-1245b- CAGAUGA 97 103 7mer-1a MIMAT0019951
hsa-miR-4330 CUCAGAU 98 104 7mer-m8 MIMAT0016924
hsa-miR-24 GGCUCAG 100 107 8mer-1a MIMAT0000080
hsa-miR-4284 GGCUCAC 101 107 7mer-1a MIMAT0016915
hsa-miR-149 CUGGCUC 102 108 7mer-m8 MIMAT0000450
hsa-miR-4492 GGGCUGG 105 111 7mer-m8 MIMAT0019027
hsa-miR-4498 GGGCUGG 105 111 7mer-m8 MIMAT0019033
hsa-miR-762 GGGCUGG 105 111 7mer-m8 MIMAT0010313
hsa-miR-4489 GGGGCUA 107 113 7mer-1a MIMAT0019023
hsa-miR-4283 GGGGCUC 107 113 7mer-1a MIMAT0016914
hsa-miR-3151 GUGGGGC 108 115 8mer-1a MIMAT0015024
hsa-miR-4472 GUGGGGG 109 115 7mer-1a MIMAT0018999
hsa-miR-4447 GUGGGGG 109 115 7mer-1a MIMAT0018966
hsa-miR-491-5p GUGGGGA 109 115 7mer-1a MIMAT0002807
hsa-miR-299-3p AUGUGGG 110 116 7mer-m8 MIMAT0000687
hsa-miR-576-3p AGAUGUG 112 119 8mer-1a MIMAT0004796
hsa-miR-4777-5 UCUAGAU 115 122 8mer-1a MIMAT0019934
hsa-miR-519c-5 UCUAGAG 116 122 7mer-1a MIMAT0002831
hsa-miR-519b-5 UCUAGAG 116 122 7mer-1a MIMAT0005454
hsa-miR-526a UCUAGAG 116 122 7mer-1a MIMAT0002845
hsa-miR-520c-5 UCUAGAG 116 122 7mer-1a MIMAT0005455
hsa-miR-518d-5 UCUAGAG 116 122 7mer-1a MIMAT0005456
hsa-miR-3168 AGUUCUA 118 124 7mer-m8 MIMAT0015043
hsa-miR-3192 CUGGGAG 123 130 8mer-1a MIMAT0015076
hsa-miR-4646-5 CUGGGAA 124 130 7mer-1a MIMAT0019707
hsa-miR-4314 UCUGGGA 124 130 7mer-m8 MIMAT0016868
hsa-miR-1182 AGGGUCU 128 134 7mer-m8 MIMAT0005827
hsa-miR-4685-5 CCAGGGC 131 137 7mer-1a MIMAT0019771
hsa-miR-4456 CUGGUGG 143 150 8mer-1a MIMAT0018978
hsa-miR-548q CUGGUGC 144 150 7mer-1a MIMAT0011163
hsa-miR-4299 CUGGUGA 144 150 7mer-1a MIMAT0016851
hsa-miR-330-5p CUCUGGG 146 152 7mer-1a MIMAT0004693
hsa-miR-326 CUCUGGG 146 152 7mer-1a MIMAT0000756
hsa-miR-3662 AAAAUGA 157 163 7mer-1a MIMAT0018083
hsa-miR-4480 GCCAAGU 172 178 7mer-1a MIMAT0019014
hsa-miR-4776-3 UUGCCAU 174 180 7mer-1a MIMAT0019933
hsa-miR-129-5p UUUUUGC 176 182 7mer-m8 MIMAT0000242
hsa-miR-496 GAGUAUU 181 187 7mer-m8 MIMAT0002818
hsa-miR-4694-3 AAAUGGA 186 192 7mer-m8 MIMAT0019787
hsa-miR-3174 AGUGAGU 197 203 7mer-m8 MIMAT0015051
hsa-miR-34c-5p GGCAGUG 200 206 7mer-m8 MIMAT0000686
hsa-miR-34a GGCAGUG 200 206 7mer-m8 MIMAT0000255
hsa-miR-449b GGCAGUG 200 206 7mer-m8 MIMAT0003327
hsa-miR-449a GGCAGUG 200 206 7mer-m8 MIMAT0001541
hsa-miR-2682 AGGCAGU 201 207 7mer-m8 MIMAT0013517
hsa-miR-449c AGGCAGU 201 207 7mer-m8 MIMAT0010251
hsa-miR-3714 AAGGCAG 202 209 8mer-1a MIMAT0018165
hsa-miR-3910 AAGGCAU 203 209 7mer-1a MIMAT0018184
hsa-miR-124 AAGGCAC 203 209 7mer-1a MIMAT0000422
hsa-miR-506 AAGGCAC 203 209 7mer-1a MIMAT0002878
hsa-miR-570 GAAAACA 225 232 8mer-1a MIMAT0003235
hsa-miR-4766-5 CUGAAAG 228 234 7mer-1a MIMAT0019917
hsa-miR-548s UGGCCAA 237 243 7mer-m8 MIMAT0014987
hsa-miR-3926 GGCCAAA 237 243 7mer-1a MIMAT0018201
hsa-miR-3677-5 AGUGGCC 239 245 7mer-m8 MIMAT0019221
hsa-miR-4264 CUCAGUC 243 249 7mer-1a MIMAT0016899
hsa-miR-4797-3 CUCAGUA 243 249 7mer-1a MIMAT0019973
hsa-miR-4639-3 CACUCUC 246 252 7mer-m8 MIMAT0019698
hsa-miR-3647-3 GAAAAUU 254 261 8mer-1a MIMAT0018067
hsa-miR-3929 AGGCUGA 259 265 7mer-m8 MIMAT0018206
hsa-miR-4478 AGGCUGA 259 265 7mer-m8 MIMAT0019006
hsa-miR-4419b AGGCUGA 259 265 7mer-m8 MIMAT0019034
hsa-miR-3163 AUAAAAU 265 271 7mer-1a MIMAT0015037
hsa-miR-3689f GUGAUAU 269 275 7mer-m8 MIMAT0019010
hsa-miR-3689e GUGAUAU 269 275 7mer-m8 MIMAT0019009
hsa-miR-3689b GUGAUAU 269 275 7mer-m8 MIMAT0018180
hsa-miR-3689a- GUGAUAU 269 275 7mer-m8 MIMAT0018117
hsa-miR-1245 AGUGAUC 271 277 7mer-1a MIMAT0005897
hsa-miR-3606 UAGUGAA 272 278 7mer-1a MIMAT0017983
hsa-miR-921 UAGUGAG 272 278 7mer-1a MIMAT0004971
hsa-miR-3591-5 UUAGUGU 273 279 7mer-1a MIMAT0019876
hsa-miR-342-3p CUCACAC 298 304 7mer-1a MIMAT0000753
hsa-miR-1229 UCUCACC 299 305 7mer-1a MIMAT0005584
hsa-miR-146b-3 GCCCUGU 306 312 7mer-m8 MIMAT0004766
hsa-miR-1291 GGCCCUG 307 313 7mer-m8 MIMAT0005881
hsa-miR-423-3p GCUCGGU 312 318 7mer-1a MIMAT0001340
hsa-miR-4252 GCCACUG 319 325 7mer-m8 MIMAT0016886
hsa-miR-5095 UACAGGC 330 337 8mer-1a MIMAT0020600
hsa-miR-4438 ACAGGCU 330 336 7mer-1a MIMAT0018956
hsa-miR-4774-5 CUGGUAU 337 343 7mer-m8 MIMAT0019929
hsa-miR-138 GCUGGUG 339 345 7mer-1a MIMAT0000430
hsa-miR-18a AAGGUGC 343 350 8mer-1a MIMAT0000072
hsa-miR-18b AAGGUGC 343 350 8mer-1a MIMAT0001412
hsa-miR-4735-3 AAGGUGC 343 350 8mer-1a MIMAT0019861
hsa-miR-4521 CUAAGGA 346 352 7mer-1a MIMAT0019058
hsa-miR-4763-5 GCCUGCC 359 365 7mer-m8 MIMAT0019912
hsa-miR-4454 GAUCCGA 365 371 7mer-1a MIMAT0018976
hsa-miR-1245 AGUGAUC 367 373 7mer-m8 MIMAT0005897
hsa-miR-4680-5 GAACUCU 383 389 7mer-1a MIMAT0019764
hsa-miR-3545-3 UGAACUG 384 390 7mer-1a MIMAT0019814
hsa-miR-4635 CUUGAAG 386 392 7mer-1a MIMAT0019692
hsa-miR-3663-5 CUGGUCU 390 396 7mer-m8 MIMAT0018084
hsa-miR-4755-3 GCCAGGC 396 402 7mer-m8 MIMAT0019896
hsa-miR-4435 UGGCCAG 398 405 8mer-1a MIMAT0018951
hsa-miR-3187-3 UGGCCAU 399 405 7mer-1a MIMAT0015069
hsa-miR-4701-5 UGGCCAC 399 405 7mer-1a MIMAT0019798
hsa-miR-548s UGGCCAA 399 405 7mer-1a MIMAT0014987
hsa-miR-588 UGGCCAC 399 405 7mer-1a MIMAT0003255
hsa-miR-1279 CAUAUUG 403 409 7mer-m8 MIMAT0005937
hsa-miR-197 UCACCAC 408 414 7mer-1a MIMAT0000227
hsa-miR-5096 UUUCACC 409 415 7mer-m8 MIMAT0020603
hsa-miR-629 GGGUUUA 413 419 7mer-1a MIMAT0004810
hsa-miR-4463 AGACUGG 417 423 7mer-m8 MIMAT0018987
hsa-miR-411 AGUAGAC 423 429 7mer-1a MIMAT0003329
hsa-miR-3149 UUGUAUG 433 439 7mer-1a MIMAT0015022
hsa-miR-590-3p AAUUUUA 438 444 7mer-1a MIMAT0004801
hsa-miR-4775 UAAUUUU 438 444 7mer-m8 MIMAT0019931
hsa-miR-4735-5 CUAAUUU 439 445 7mer-m8 MIMAT0019860
hsa-miR-3135 GCCUAGG 446 452 7mer-1a MIMAT0015001
hsa-miR-4787-3 AUGCGCC 457 463 7mer-m8 MIMAT0019957
hsa-miR-4269 CAGGCAC 486 493 8mer-1a MIMAT0016897
hsa-miR-4692 CAGGCAG 487 493 7mer-1a MIMAT0019783
hsa-miR-4514 CAGGCAG 487 493 7mer-1a MIMAT0019051
hsa-miR-4742-5 CAGGCAA 487 493 7mer-1a MIMAT0019872
hsa-miR-4722-3 CCUGCCA 494 500 7mer-1a MIMAT0019837
hsa-miR-1976 CUCCUGC 495 502 8mer-1a MIMAT0009451
hsa-miR-4279 UCUCCUC 497 503 7mer-1a MIMAT0016909
hsa-miR-1206 GUUCAUG 507 513 7mer-m8 MIMAT0005870
hsa-miR-4532 CCCGGGG 513 519 7mer-1a MIMAT0019071
hsa-miR-4772-3 CUGCAAC 533 539 7mer-m8 MIMAT0019927
hsa-miR-4284 GGCUCAC 539 545 7mer-m8 MIMAT0016915
hsa-miR-4638-5 CUCGGCU 542 549 8mer-1a MIMAT0019695
hsa-miR-1307 CUCGGCG 543 549 7mer-1a MIMAT0005951
hsa-miR-371-3p AGUGCCG 553 559 7mer-m8 MIMAT0000723
hsa-miR-122 GGAGUGU 561 567 7mer-1a MIMAT0000421
hsa-miR-3135b GCUGGAG 563 569 7mer-m8 MIMAT0018985
hsa-miR-3652 GGCUGGA 564 570 7mer-m8 MIMAT0018072
hsa-miR-4430 GGCUGGA 564 570 7mer-m8 MIMAT0018945
hsa-miR-4294 GGAGUCU 585 592 8mer-1a MIMAT0016849
hsa-miR-3198 UGGAGUC 586 592 7mer-m8 MIMAT0015083
hsa-miR-4309 UGGAGUC 586 592 7mer-m8 MIMAT0016859
hsa-miR-1289 GGAGUCC 586 592 7mer-1a MIMAT0005879
hsa-miR-4534 GAUGGAG 588 594 7mer-m8 MIMAT0019073
hsa-miR-1273f GAGAUGG 590 597 8mer-1a MIMAT0020601
hsa-miR-143 GAGAUGA 591 597 7mer-1a MIMAT0000435
hsa-miR-4770 GAGAUGA 591 597 7mer-1a MIMAT0019924
hsa-miR-4708-5 GAGAUGC 591 597 7mer-1a MIMAT0019809
hsa-miR-129-5p UUUUUGC 596 602 7mer-1a MIMAT0000242
hsa-miR-342-3p CUCACAC 618 624 7mer-1a MIMAT0000753
hsa-miR-1229 UCUCACC 619 625 7mer-1a MIMAT0005584
hsa-miR-4652-3 UUCUGUU 625 632 8mer-1a MIMAT0019717
hsa-miR-136 CUCCAUU 653 660 8mer-1a MIMAT0000448
hsa-miR-194 GUAACAG 661 667 7mer-1a MIMAT0000460
hsa-miR-4650-3 GGUAGAA 684 691 8mer-1a MIMAT0019714
hsa-miR-3529 GGUAGAC 685 691 7mer-1a MIMAT0019828
hsa-miR-379 GGUAGAC 685 691 7mer-1a MIMAT0000733
hsa-miR-4451 GGUAGAG 685 691 7mer-1a MIMAT0018973
hsa-miR-4774-5 CUGGUAU 687 693 7mer-1a MIMAT0019929
hsa-miR-4490 CUGGUAA 687 693 7mer-1a MIMAT0019025
hsa-miR-455-3p CAGUCCA 701 708 8mer-1a MIMAT0004784
hsa-miR-1910 CAGUCCU 702 708 7mer-1a MIMAT0007884
hsa-miR-3942-3 UUCAGAU 708 715 8mer-1a MIMAT0019230
hsa-miR-219-1- GAGUUGA 723 730 8mer-1a MIMAT0004567
hsa-miR-571 GAGUUGG 724 730 7mer-1a MIMAT0003236
hsa-miR-4780 CCCUUGA 728 734 7mer-m8 MIMAT0019939
hsa-miR-3160-3 GAGCUGA 738 745 8mer-1a MIMAT0015034
hsa-miR-558 GAGCUGC 739 745 7mer-1a MIMAT0003222
hsa-miR-4487 GAGCUGG 739 745 7mer-1a MIMAT0019021
hsa-miR-1179 AGCAUUC 745 751 7mer-1a MIMAT0005824
hsa-miR-3194-3 GCUCUGC 754 760 7mer-1a MIMAT0019218
hsa-miR-1973 CCGUGCA 758 764 7mer-1a MIMAT0009448
hsa-miR-186 AAAGAAU 772 778 7mer-m8 MIMAT0000456
hsa-miR-518a-5 UGCAAAG 775 781 7mer-m8 MIMAT0005457
hsa-miR-527 UGCAAAG 775 781 7mer-m8 MIMAT0002862
hsa-miR-217 ACUGCAU 778 784 7mer-1a MIMAT0000274
hsa-miR-4418 ACUGCAG 778 784 7mer-1a MIMAT0018930
hsa-miR-509-5p ACUGCAG 778 784 7mer-1a MIMAT0004779
hsa-miR-509-3- ACUGCAG 778 784 7mer-1a MIMAT0004975
hsa-miR-1278 AGUACUG 780 786 7mer-m8 MIMAT0005936
hsa-miR-548k AAAGUAC 782 788 7mer-m8 MIMAT0005882
hsa-miR-3973 CAAAGUA 783 790 8mer-1a MIMAT0019358
hsa-miR-520g CAAAGUG 784 790 7mer-1a MIMAT0002858
hsa-miR-520h CAAAGUG 784 790 7mer-1a MIMAT0002867
hsa-miR-4650-3 GGUAGAA 799 805 7mer-m8 MIMAT0019714
hsa-miR-3927 AGGUAGA 800 807 8mer-1a MIMAT0018202
hsa-miR-196a AGGUAGU 801 807 7mer-1a MIMAT0000226
hsa-miR-196b AGGUAGU 801 807 7mer-1a MIMAT0001080
hsa-miR-3163 AUAAAAU 814 820 7mer-1a MIMAT0015037
hsa-miR-107 GCAGCAU 820 826 7mer-m8 MIMAT0000104
hsa-miR-103a GCAGCAU 820 826 7mer-m8 MIMAT0000101
hsa-miR-15a AGCAGCA 821 827 7mer-m8 MIMAT0000068
hsa-miR-15b AGCAGCA 821 827 7mer-m8 MIMAT0000417
hsa-miR-16 AGCAGCA 821 827 7mer-m8 MIMAT0000069
hsa-miR-195 AGCAGCA 821 827 7mer-m8 MIMAT0000461
hsa-miR-424 AGCAGCA 821 827 7mer-m8 MIMAT0001341
hsa-miR-497 AGCAGCA 821 827 7mer-m8 MIMAT0002820
hsa-miR-4530 CCAGCAG 823 829 7mer-m8 MIMAT0019069
hsa-miR-634 ACCAGCA 824 830 7mer-m8 MIMAT0003304
hsa-miR-1226 CACCAGC 825 831 7mer-m8 MIMAT0005577
hsa-miR-29c AGCACCA 827 833 7mer-m8 MIMAT0000681
hsa-miR-29b AGCACCA 827 833 7mer-m8 MIMAT0000100
hsa-miR-29a AGCACCA 827 833 7mer-m8 MIMAT0000086
hsa-miR-3663-3 GAGCACC 828 834 7mer-m8 MIMAT0018085
hsa-miR-548a-3 AAAACUG 841 847 7mer-1a MIMAT0003251
hsa-miR-548f AAAACUG 841 847 7mer-1a MIMAT0005895
hsa-miR-548e AAAACUG 841 847 7mer-1a MIMAT0005874
hsa-miR-4797-5 ACAGAGU 847 853 7mer-m8 MIMAT0019972
hsa-miR-301b AGUGCAA 855 862 8mer-1a MIMAT0004958
hsa-miR-130b AGUGCAA 855 862 8mer-1a MIMAT0000691
hsa-miR-130a AGUGCAA 855 862 8mer-1a MIMAT0000425
hsa-miR-3666 AGUGCAA 855 862 8mer-1a MIMAT0018088
hsa-miR-454 AGUGCAA 855 862 8mer-1a MIMAT0003885
hsa-miR-4295 AGUGCAA 855 862 8mer-1a MIMAT0016844
hsa-miR-301a AGUGCAA 855 862 8mer-1a MIMAT0000688
hsa-miR-4671-3 UAGUGCA 856 862 7mer-m8 MIMAT0019753
hsa-miR-4789-3 ACACAUA 863 869 7mer-m8 MIMAT0019960
hsa-miR-2681 AUCAUGG 871 877 7mer-1a MIMAT0013516 




>NM_000628
GCTCTGAGAAGGAAACACACTCGGCTGGGCACAGTGACGTACTCCATCTC
ACATCTGCCTCAGTGAGGGATCAGGGCAGCAAACAAGGGCCAAGACCATC
TGAGCCAGCCCCACATCTAGAACTCCCAGACCCTGGACTTAGCCACCAGA
GAGCTACATTTTAAAGGCTGTCTTGGCAAAAATACTCCATTTGGGAACTC
ACTGCCTTATAAAGGCTTTCATGATGTTTTCAGAAGTTGGCCACTGAGAG
TGTAATTTTCAGCCTTTTATATCACTAAAATAAGATCATGTTTTAATTGT
GAGAAACAGGGCCGAGCACAGTGGCTCACGCCTGTAATACCAGCACCTTA
GAGGTCGAGGCAGGCGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTG
GCCAATATGGTGAAACCCAGTCTCTACTAAAAATACAAAAATTAGCTAGG
CATGATGGCGCATGCCTATAATCCCAGCTACTCGAGTGCCTGAGGCAGGA
GAATTGCATGAACCCGGGAGGAGGAGGAGGAGGTTGCAGTGAGCCGAGAT
AGCGGCACTGCACTCCAGCCTGGGTGACAAAGTGAGACTCCATCTCAAAA
AAAAAAAAAAAAAAAATTGTGAGAAACAGAAATACTTAAAATGAGGAATA
AGAATGGAGATGTTACATCTGGTAGATGTAACATTCTACCAGATTATGGA
TGGACTGATCTGAAAATCGACCTCAACTCAAGGGTGGTCAGCTCAATGCT
ACACAGAGCACGGACTTTTGGATTCTTTGCAGTACTTTGAATTTATTTTT
CTACCTATATATGTTTTATATGCTGCTGGTGCTCCATTAAAGTTTTACTC
TGTGTTGCACTATATGTGTTCATGATA
Download NM_000628.fa file format



Updated on June 12, 2013