A GUI for the identification of differentially expressed genes that supports Reproducible Research.

Authors: Dr Francesco Russo and Dr Claudia Angelini (IAC-CNR)

Additionally, Dario Righelli is collaborating to the development of RNASeqGUI since version 0.99.3

The data example illustrated in the User manual can be downloaded below.

Downloand the example here: EXAMPLE

The bam files taken from the leebamview package (available at http://bioconductor.org/leeBamViews.html) to test the "Bam Exploration Interface", can be downloaded from here: fastdemo.tar.gz

To cite us, please use :

F. Russo and C. Angelini. RNASeqGUI: a GUI for analysing RNA-Seq data. Bioinformatics, 30 (17): 2514-2516, (2014) doi: 10.1093/bioinformatics/btu308

F. Russo, D. Righelli and C. Angelini. Advancements in RNASeqGUI towards a Reproducible Analysis of RNA-Seq Experiment. BioMed Research International, 2016, 7972351.
doi: http://dx.doi.org/10.1155/2016/7972351